Skip to navigation Skip to content
  • Woodruff
  • Business
  • Health Sciences
  • Law
  • MARBL
  • Oxford College
  • Theology
  • Schools
    • Undergraduate

      • Emory College
      • Oxford College
      • Business School
      • School of Nursing

      Community

      • Emory College
      • Oxford College
      • Business School
      • School of Nursing
    • Graduate

      • Business School
      • Graduate School
      • School of Law
      • School of Medicine
      • School of Nursing
      • School of Public Health
      • School of Theology
  • Libraries
    • Libraries

      • Robert W. Woodruff
      • Business
      • Chemistry
      • Health Sciences
      • Law
      • MARBL
      • Music & Media
      • Oxford College
      • Theology
    • Library Tools

      • Course Reserves
      • Databases
      • Digital Scholarship (ECDS)
      • discoverE
      • eJournals
      • Electronic Dissertations
      • EmoryFindingAids
      • EUCLID
      • ILLiad
      • OpenEmory
      • Research Guides
  • Resources
    • Resources

      • Administrative Offices
      • Emory Healthcare
      • Academic Calendars
      • Bookstore
      • Campus Maps
      • Shuttles and Parking
      • Athletics: Emory Eagles
      • Arts at Emory
      • Michael C. Carlos Museum
      • Emory News Center
      • Emory Report
    • Resources

      • Emergency Contacts
      • Information Technology (IT)
      • Outlook Web Access
      • Office 365
      • Blackboard
      • OPUS
      • PeopleSoft Financials: Compass
      • Careers
      • Human Resources
      • Emory Alumni Association
  • Browse
    • Works by Author
    • Works by Journal
    • Works by Subject
    • Works by Dept
    • Faculty by Dept
  • For Authors
    • How to Submit
    • Deposit Advice
    • Author Rights
    • Publishing Your Data
    • FAQ
    • Emory Open Access Policy
    • Open Access Fund
  • About OpenEmory
    • About OpenEmory
    • About Us
    • Citing Articles
    • Contact Us
    • Privacy Policy
    • Terms of Use
 
Contact Us

Filter Results:

Author

  • Visootsak, Jeannie (2)
  • Adamson, L. B. (1)
  • Angeles-Han, Sheila (1)
  • Askree, Hussain (1)
  • Bakeman, R. (1)
  • Banerjee, Christopher (1)
  • Banta, Heather (1)
  • Bean, Lora (1)
  • Benito, Joseph (1)
  • Bohnsack, John F. (1)
  • Brown, Milton R (1)
  • Buterbaugh, Allison (1)
  • Chan, Anthony (1)
  • Chi, Tim (1)
  • Chidamparam, Kumaravel (1)
  • Chin, Ephrem LH (1)
  • Coffee, Bradford (1)
  • Conneely, Karen N (1)
  • Corces, Victor (1)
  • Cubells, Joseph F (1)
  • Cutler, David J (1)
  • Engelhardt, Heidi (1)
  • Glass, David N. (1)
  • Gurudatta, Baraka V. (1)
  • Hegde, Madhuri (1)
  • Hess, B. (1)
  • Jiang, Yunxuan (1)
  • Kennedy, Christine (1)
  • Kocerha, Jannet (1)
  • Larkin, Katherine (1)
  • Li, Shi Hua (1)
  • Li, Xiao-Jiang (1)
  • Liu, Yuhong (1)
  • Mellins, Elizabeth D. (1)
  • Moran, Sean (1)
  • Mroczkowski, Henry J. (1)
  • Mulle, Jennifer (1)
  • Nelson, Kate (1)
  • Neumann, Adam (1)
  • Ponder, Lori A. (1)
  • Prahalad, Sampath (1)
  • Punaro, Marilynn (1)
  • Reed, Ann M. (1)
  • Rohani-Pichavant, Mina (1)
  • Rouster Stevens, Kelly A. (1)
  • Sandstrom, David J. (1)
  • Sanyal, Subhabrata (1)
  • Shankar, Suma (1)
  • Sharp, William (1)
  • Sudman, Marc (1)
  • Suppiah, Somu (1)
  • Tanner, Alice (1)
  • Thompson, Susan D. (1)
  • Timmerman, Christina (1)
  • Vogler, Larry B (1)
  • Wallace, Carol A. (1)
  • Willoughby, David (1)
  • Wise, Carol A. (1)
  • Xu, Yan (1)
  • Yang, Jin Jing (1)
  • Yang, Jingping (1)
  • Yang, Shang-Hsun (1)
  • Zwick, Michael (1)

Subject

  • Biology, Genetics (3)
  • Biology, Neuroscience (2)
  • Health Sciences, Human Development (2)
  • Biology, Molecular (1)
  • Health Sciences, Epidemiology (1)
  • Language, General (1)
  • Psychology, Behavioral (1)
  • Psychology, Developmental (1)

Journal

  • Annals of Paediatric Rheumatology (1)
  • Arthritis and Rheumatism (1)
  • BMC Genetics (1)
  • BMC Neuroscience (1)
  • Current Psychiatry Reports (1)
  • Journal of Intellectual Disability Research (1)
  • Journal of Neuroscience Nursing (1)

Keyword

  • genet (4)
  • syndrom (3)
  • anim (2)
  • down (2)
  • gene (2)
  • studi (2)
  • a (1)
  • acgh (1)
  • analysi (1)
  • arthriti (1)
  • asd (1)
  • associ (1)
  • autism (1)
  • becker (1)
  • behavior (1)
  • biomedicin (1)
  • blood (1)
  • breakpoint (1)
  • cgh (1)
  • chang (1)
  • character (1)
  • congenit (1)
  • copi (1)
  • copynumb (1)
  • danlo (1)
  • databas (1)
  • defect (1)
  • delet (1)
  • develop (1)
  • dietari (1)
  • disabl (1)
  • diseas (1)
  • disord (1)
  • duplic (1)
  • dystrophi (1)
  • ehler (1)
  • ehlersdanlo (1)
  • express (1)
  • famili (1)
  • feed (1)
  • femal (1)
  • gut (1)
  • heart (1)
  • hered (1)
  • histori (1)
  • human (1)
  • huntington (1)
  • idiopath (1)
  • intak (1)
  • intellectu (1)
  • intragen (1)
  • juvenil (1)
  • languag (1)
  • life (1)
  • longitudin (1)
  • m (1)
  • macaca (1)
  • male (1)
  • messeng (1)
  • microarray (1)
  • microbiom (1)
  • microdelet (1)
  • model (1)
  • modifi (1)
  • molecular (1)
  • monkey (1)
  • mrna (1)
  • mulatta (1)
  • muscular (1)
  • musculardystrophi (1)
  • nerv (1)
  • nervous (1)
  • neurobehavior (1)
  • number (1)
  • nutrit (1)
  • profil (1)
  • progress (1)
  • protein (1)
  • psychiatri (1)
  • rearrang (1)
  • rheumatoid (1)
  • rna (1)
  • scienc (1)
  • spectrum (1)
  • system (1)
  • technolog (1)
  • tissu (1)
  • transcriptom (1)
  • ucsc (1)
  • updat (1)

Author affiliation

  • Secondary Appointment: Department of Pediatrics (1)

Author department

  • Hum Gen: Medical Genetics (2)
  • GME: Grad Medicine Educ (1)
  • Marcus Center (1)
  • NND-Neuroscience (1)
  • Peds: Cystic Fibrosis (1)
  • Peds: Gastroenterology (1)
  • Peds: Rheumatology (1)
  • Rheumatology (1)

Search Results for all work with filters:

  • 2013
  • Health Sciences, General
  • t
  • Hum Gen: Admin

Work 1-7 of 7

Sorted by relevance

Article

Detection limit of intragenic deletions with targeted array comparative genomic hybridization

by Hussain Askree; Ephrem LH Chin; Lora Bean; Bradford Coffee; Alice Tanner; Madhuri Hegde

2013

Subjects
  • Biology, Genetics
  • Health Sciences, General
  • File Download
  • View Abstract

Abstract:Close

Background: Pathogenic mutations range from single nucleotide changes to deletions or duplications that encompass a single exon to several genes. The use of gene-centric high-density array comparative genomic hybridization (aCGH) has revolutionized the detection of intragenic copy number variations. We implemented an exon-centric design of high-resolution aCGH to detect single- and multi-exon deletions and duplications in a large set of genes using the OGT 60 K and 180 K arrays. Here we describe the molecular characterization and breakpoint mapping of deletions at the smaller end of the detectable range in several genes using aCGH.Results: The method initially implemented to detect single to multiple exon deletions, was able to detect deletions much smaller than anticipated. The selected deletions we describe vary in size, ranging from over 2 kb to as small as 12 base pairs. The smallest of these deletions are only detectable after careful manual review during data analysis. Suspected deletions smaller than the detection size for which the method was optimized, were rigorously followed up and confirmed with PCR-based investigations to uncover the true detection size limit of intragenic deletions with this technology. False-positive deletion calls often demonstrated single nucleotide changes or an insertion causing lower hybridization of probes demonstrating the sensitivity of aCGH.Conclusions: With optimizing aCGH design and careful review process, aCGH can uncover intragenic deletions as small as dozen bases. These data provide insight that will help optimize probe coverage in array design and illustrate the true assay sensitivity. Mapping of the breakpoints confirms smaller deletions and contributes to the understanding of the mechanism behind these events. Our knowledge of the mutation spectra of several genes can be expected to change as previously unrecognized intragenic deletions are uncovered. © 2013 Askree et al.; licensee BioMed Central Ltd.

Article

Contribution of Family History in Co-occurring Down Syndrome and Ehlers-Danlos Syndrome

by Allison Buterbaugh; Henry J. Mroczkowski; Suma Shankar; Jeannie Visootsak

2013

Subjects
  • Biology, Neuroscience
  • Health Sciences, Human Development
  • Health Sciences, General
  • View on PubMed Central
  • View Abstract

Abstract:Close

Nearly all children with Down syndrome (DS) are born with hypotonia which later improves with age. We present a case of a 32-month-old female with DS who has persistent hypotonia and ligamentous hyperlaxity. She was subsequently diagnosed with Ehlers-Danlos Syndrome-Hypermobility type (EDS-HMT) based on family history, which resulted in the significant global developmental delay compared to age-matched peers with DS. Further clinical investigation is recommended in individuals with DS who appear to have developmental profiles significantly below what would be expected due to typical Trisomy 21 so that additional diagnostic testing and appropriate interventional therapy may be provided. Specifically, timely diagnosis of inherited disorders such as EDS-HMT is important in identifying other family members with the condition.

Article

Longitudinal transcriptomic dysregulation in the peripheral blood of transgenic Huntington's disease monkeys

by Jannet Kocerha; Yuhong Liu; David Willoughby; Kumaravel Chidamparam; Joseph Benito; Kate Nelson; Yan Xu; Tim Chi; Heidi Engelhardt; Sean Moran; Shang-Hsun Yang; Shi Hua Li; Xiao-Jiang Li; Katherine Larkin; Adam Neumann; Heather Banta; Jin Jing Yang; Anthony Chan

2013

Subjects
  • Biology, Genetics
  • Biology, Neuroscience
  • Health Sciences, General
  • File Download
  • View Abstract

Abstract:Close

Background: Huntington's Disease (HD) is a progressive neurodegenerative disorder caused by an expansion in the polyglutamine (polyQ) region of the Huntingtin (HTT) gene. The clinical features of HD are characterized by cognitive, psychological, and motor deficits. Molecular instability, a core component in neurological disease progression, can be comprehensively evaluated through longitudinal transcriptomic profiling. Development of animal models amenable to longitudinal examination enables distinct disease-associated mechanisms to be identified. Results: Here we report the first longitudinal study of transgenic monkeys with genomic integration of various lengths of the human HTT gene and a range of polyQ repeats. With this unique group of transgenic HD nonhuman primates (HD monkeys), we profiled over 47,000 transcripts from peripheral blood collected over a 2 year timespan from HD monkeys and age-matched wild-type control monkeys. Conclusions: Messenger RNAs with expression patterns which diverged with disease progression in the HD monkeys considerably facilitated our search for transcripts with diagnostic or therapeutic potential in the blood of human HD patients, opening up a new avenue for clinical investigation.

Article

The Drosophila Transcription Factor Adf-1 (nalyot) Regulates Dendrite Growth by Controlling FasII and Staufen Expression Downstream of CaMKII and Neural Activity

by Christina Timmerman; Somu Suppiah; Baraka V. Gurudatta; Jingping Yang; Christopher Banerjee; David J. Sandstrom; Victor Corces; Subhabrata Sanyal

2013

Subjects
  • Health Sciences, General
  • Biology, Molecular
  • View on PubMed Central
  • View Abstract

Abstract:Close

Memory deficits in Drosophila nalyot mutants suggest that the Myb family transcription factor Adf-1 is an important regulator of developmental plasticity in the brain. However, the cellular functions for this transcription factor in neurons or molecular mechanisms by which it regulates plasticity remain unknown. Here, we use in vivo 3D reconstruction of identifiable larval motor neuron dendrites to show that Adf-1 is required cell autonomously for dendritic development and activity-dependent plasticity of motor neurons downstream of CaMKII. Adf-1 inhibition reduces dendrite growth and neuronal excitability, and results in motor deficits and altered transcriptional profiles. Surprisingly, analysis by comparative chromatin immunoprecipitation followed by sequencing (ChIP-Seq) of Adf-1, RNA Polymerase II (Pol II), and histone modifications in Kc cells shows that Adf-1 binding correlates positively with high Pol II-pausing indices and negatively with active chromatin marks such as H3K4me3 and H3K27ac. Consistently, the expression of Adf-1 targets Staufen and Fasciclin II (FasII), identified through larval brain ChIP-Seq for Adf-1, is negatively regulated by Adf-1, and manipulations of these genes predictably modify dendrite growth. Our results imply mechanistic interactions between transcriptional and local translational machinery in neurons as well as conserved neuronal growth mechanisms mediated by cell adhesion molecules, and suggest that CaMKII, Adf-1, FasII, and Staufen influence crucial aspects of dendrite development and plasticity with potential implications for memory formation. Further, our experiments reveal molecular details underlying transcriptional regulation by Adf-1, and indicate active interaction between Adf-1 and epigenetic regulators of gene expression during activity-dependent neuronal plasticity.

Article

Effect of congenital heart defects on language development in toddlers with Down syndrome

by Jeannie Visootsak; B. Hess; R. Bakeman; L. B. Adamson

2013

Subjects
  • Language, General
  • Psychology, Developmental
  • Health Sciences, General
  • View on PubMed Central
  • View Abstract

Abstract:Close

Background Down syndrome (DS, OMIM #190685) is the most commonly identified genetic form of intellectual disability with congenital heart defect (CHD) occurring in 50% of cases. With advances in surgical techniques and an increasing lifespan, this has necessitated a greater understanding of the neurodevelopmental consequences of CHDs. Herein, we explore the impact of CHD on language development in children with DS. Methods Twenty-nine children with DS were observed systematically in parent–child interactions using the Communication Play Protocol to evaluate their language use; they also completed the Mullen Scales of Early Learning and MacArthur Communication Development Inventory. Mean ages were 31.2 months for children with DS and CHD (DS + CHD, n = 12) and 32.1 months for children with DS and a structurally normal heart (DS − CHD, n = 17). Results Compared with the DS − CHD controls, the DS + CHD group revealed lower scores in multiple areas, including fine motor skills and expressive and receptive vocabulary. Whereas most differences were not statistically significant, the Communication Development Inventory word count and symbol-infused joint engagement differed significantly (P < 0.01) and marginally (P = 0.09) between groups. Conclusions Finding that CHDs may account for part of the variation in language delay allows us to consider the specific mechanisms underlying the impact of CHDs on language acquisition in children with DS. Conclusions from this first study on early language outcomes of children with DS + CHD may be useful for clinicians in providing developmental surveillance and early intervention programmes with specific emphasis on language therapy as part of long-term follow-up for children with DS + CHD.

Article

The Gut Microbiome: A New Frontier in Autism Research

by Jennifer Mulle; William Sharp; Joseph F Cubells

2013

Subjects
  • Health Sciences, Epidemiology
  • Psychology, Behavioral
  • Health Sciences, General
  • File Download
  • View on PubMed Central
  • View Abstract

Abstract:Close

The human gut harbors a complex community of microbes that profoundly influence many aspects of growth and development, including development of the nervous system. Advances in high-throughput DNA sequencing methods have led to rapidly expanding knowledge about this gut microbiome. Here, we review fundamental emerging data on the human gut microbiome, with a focus on potential interactions between the microbiome and autism spectrum disorders (ASD) and consider research on atypical patterns of feeding and nutrition in ASD and how they might interact with the microbiome. Finally we selectively survey results from studies in rodents on the impact of the microbiome on neurobehavioral development. The evidence reviewed here suggests that a deeper understanding of the gut microbiome could open up new avenues of research on ASD, including potential novel treatment strategies.

Article

Susceptibility to childhood onset rheumatoid arthritis: Investigation of a weighted genetic risk score that integrates cumulative effects of variants at five genetic loci

by Sampath Prahalad; Karen N Conneely; Yunxuan Jiang; Marc Sudman; Carol A. Wallace; Milton R Brown; Lori A. Ponder; Mina Rohani-Pichavant; Michael Zwick; David J Cutler; Sheila Angeles-Han; Larry B Vogler; Christine Kennedy; Kelly A. Rouster Stevens; Carol A. Wise; Marilynn Punaro; Ann M. Reed; Elizabeth D. Mellins; John F. Bohnsack; David N. Glass; Susan D. Thompson

2013

Subjects
  • Health Sciences, General
  • Health Sciences, Human Development
  • Biology, Genetics
  • File Download
  • View on PubMed Central
  • View Abstract

Abstract:Close

Objectives Children with rheumatoid-factor or anti-citrullinated peptide antibody positive juvenile idiopathic arthritis represent the childhood onset of RA (CORA). To test the hypothesis that adult-onset RA-associated variants are also associated with CORA, we investigated RA-associated variants at five loci in our CORA cohort. We also assessed the cumulative association of these variants in the susceptibility to CORA using a weighted genetic risk score (wGRS). Methods 155 children with CORA and 684 healthy controls were genotyped for five variants in PTPN22, TRAF1/C5, STAT4, and TNFAIP3 loci. High-resolution HLA-DRB1 genotypes were available for 149 cases and 373 controls. We tested each locus for association with CORA via logistic regression. We also computed a wGRS for each subject, with weights based on the natural log of the published odds ratios for the alleles investigated, and used logistic regression to test the wGRS for association with CORA. Results CORA was associated with TNFAIP3-rs10499194 [OR 0.60 (95%CI 0.44–0.83)], PTPN22-rs2476601 [OR 1.61 (1.11–2.31)], and STAT4-rs7574865 [OR 1.41 (1.06–1.87)] variants. The wGRS was significantly different between cases and controls (P<2×10−16). Individuals in the third to fifth quintiles of wGRS had a significantly increased disease risk compared to the baseline. Higher wGRS associated with increased risk of CORA, especially among males. Conclusions TNFAIP3, STAT4 and PTPN22 variants are associated with CORA in a similar magnitude and direction as in RA, suggesting that adult-onset RA and CORA share common genetic risk factors. Utilizing a wGRS, we have demonstrated the cumulative association of RA-associated variants in the susceptibility to CORA.
Site Statistics
  • 16,862
  • Total Works
  • 3,646,202
  • Downloads
  • 1,122,113
  • Downloads This Year
  • 6,807
  • Faculty Profiles

Copyright © 2016 Emory University - All Rights Reserved
540 Asbury Circle, Atlanta, GA 30322-2870
(404) 727-6861
Privacy Policy | Terms & Conditions

v2.2.8-dev

Contact Us Recent and Popular Items
Download now