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Author Notes:

See publication for full list of authors and contributors.

Correspondence to Dr Wendy Chung, Division of Molecular Genetics, Department of Pediatrics, Columbia University, Russ Berrie Pavilion, 1150 St Nicholas Avenue, Rm 620, New York, NY 10032, USA, wkc15@columbia.edu; Jacques S Beckmann, Service de Génétique Médicale, CHUV, Ave Pierrre Decker, 2, 1011 Lausanne, Switzerland, jacques.beckmann@unil.ch; Alexandre Reymond, Center for Integrative Genomics, University of Lausanne, Le Génopode, 1015 Lausanne, Switzerland, alexandre.reymond@unil.ch; Sébastien Jacquemont, Service de Génétique Médicale, CHUV, Ave Pierrre Decker, 2, 1011 Lausanne, Switzerland, sebastien.jacquemont@chuv.ch

FZ, EHS, NDB, EH: equally contributing first authors.

AR, JSB, WKC, SJ: equally contributing senior authors.

All authors contributed to the concept, design, acquisition of data or analysis and interpretation of data. All authors contributed to drafting or revising the content and approved the final version.

We thank the participants, families, and referring providers for their contribution.

We thank the coordinators and staff at the Simons Simplex Collection (SSC) sites.

We are grateful to all of the families at the participating Simons Simplex Collection (SSC) sites, as well as the principal investigators (A Beaudet, R Bernier, J Constantino, E Cook, E Fombonne, D Geschwind, R Goin-Kochel, E Hanson, D Grice, A Klin, D Ledbetter, C Lord, C Martin, D Martin, R Maxim, J Miles, O Ousley, K Pelphrey, B Peterson, J Piggot, C Saulnier, M State, W Stone, J Sutcliffe, C Walsh, Z Warren, E Wijsman).

We appreciate obtaining access to phenotypic data on SFARI Base.

Competing interests are disclosed in the ICMJE conflit of interest forms

Subjects:

Research Funding:

SJ is recipient of a ‘bourse de relève académique de la Faculté de Biologie et Médecine de l'Université de Lausanne’ and KM is a grantee of a scholarship from the Swiss Scientific Exchange NMS Programme.

This work is supported by the Leenaards Foundation Prize (SJ and AR), the Swiss National Science Foundation (AR and JSB) and a specific SNSF Sinergia grant (AR).

Phenotyping of EGC UT individuals was supported by Targeted Financing from Estonian Government grant SF0180142Cs08, Centre of Translational Genomics grant SP1GVARENG, and by the European Union through the European Regional Development Fund, in the frame of Centre of Excellence in Genomics.

he Simons VIP work is supported by the Simons Foundation Autism Research Initiative (SFARI).

Keywords:

  • Science & Technology
  • Life Sciences & Biomedicine
  • Genetics & Heredity
  • COPY-NUMBER VARIATION
  • DE-NOVO
  • MICRODELETION
  • SPECTRUM
  • AUTISM
  • OBESITY
  • REARRANGEMENTS
  • INDIVIDUALS
  • ASSOCIATION
  • PHENOTYPES

A 600 kb deletion syndrome at 16p11.2 leads to energy imbalance and neuropsychiatric disorders

Tools:

Journal Title:

Journal of Medical Genetics

Volume:

Volume 49, Number 10

Publisher:

, Pages 660-668

Type of Work:

Article | Final Publisher PDF

Abstract:

Background The recurrent ~ 600 kb 16p11.2 BP4-BP5 deletion is among the most frequent known genetic aetiologies of autism spectrum disorder (ASD) and related neurodevelopmental disorders. Objective To define the medical, neuropsychological, and behavioural phenotypes in carriers of this deletion. Methods We collected clinical data on 285 deletion carriers and performed detailed evaluations on 72 carriers and 68 intrafamilial non-carrier controls. Results When compared to intrafamilial controls, full scale intelligence quotient (FSIQ) is two standard deviations lower in carriers, and there is no difference between carriers referred for neurodevelopmental disorders and carriers identified through cascade family testing. Verbal IQ (mean 74) is lower than non-verbal IQ (mean 83) and a majority of carriers require speech therapy. Over 80% of individuals exhibit psychiatric disorders including ASD, which is present in 15% of the paediatric carriers. Increase in head circumference (HC) during infancy is similar to the HC and brain growth patterns observed in idiopathic ASD. Obesity, a major comorbidity present in 50% of the carriers by the age of 7 years, does not correlate with FSIQ or any behavioural trait. Seizures are present in 24% of carriers and occur independently of other symptoms. Malformations are infrequently found, confirming only a few of the previously reported associations. Conclusions The 16p11.2 deletion impacts in a quantitative and independent manner FSIQ, behaviour and body mass index, possibly through direct influences on neural circuitry. Although non-specific, these features are clinically significant and reproducible. Lastly, this study demonstrates the necessity of studying large patient cohorts ascertained through multiple methods to characterise the clinical consequences of rare variants involved in common diseases.

Copyright information:

Published by the BMJ Publishing Group Limited.

This is an Open Access work distributed under the terms of the Creative Commons Attribution-Noncommercial 3.0 Unported License (https://creativecommons.org/licenses/by-nc/3.0/).
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